MRIQC: individual T1w report

Summary

Subject ID: 13122110752431661142020012917345215104516197000.
Date and time: 2020-01-29, 23:03.
MRIQC version: 0.11.0.
Workflow details:
- File has no metadata (sidecar JSON file missing or empty)

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.3937685654280094
cnr			3.351509198651465
efc			0.5050399718123946
fber			4488.8671875
fwhm	avg		3.6669633333333334
fwhm	x		3.59077
fwhm	y		3.71247
fwhm	z		3.69765
icvs	csf		0.22663136169143563
icvs	gm		0.38512420421845006
icvs	wm		0.38824443409011433
inu	med		1.4304616451263428
inu	range		0.30376943349838226
qi	1		0.0
qi	2		0.0012491280039970546
rpve	csf		24.76298526210922
rpve	gm		14.368929620455473
rpve	wm		18.43294132023836
size	x		176
size	y		256
size	z		256
snr	csf		4.29889694039777
snr	gm		10.188268065915679
snr	total		11.507449938742774
snr	wm		20.03518480991487
snrd	csf		53.888886980024495
snrd	gm		88.75833030963983
snrd	total		89.14187863575695
snrd	wm		124.77841861760655
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	98.10310258552347
summary	bg	mad	5.250340461730957
summary	bg	mean	9.10694408416748
summary	bg	median	7.739750862121582
summary	bg	n	2597356.0
summary	bg	p05	1.858212560415268
summary	bg	p95	21.38860845565796
summary	bg	stdv	7.301795482635498
summary	csf	k	0.5976528212907355
summary	csf	mad	84.71005249023438
summary	csf	mean	416.90386962890625
summary	csf	median	431.8719177246094
summary	csf	n	8990.0
summary	csf	p05	226.86607284545897
summary	csf	p95	560.5064422607422
summary	csf	stdv	100.45551300048828
summary	gm	k	0.1654000940784086
summary	gm	mad	67.66454315185547
summary	gm	mean	710.9247436523438
summary	gm	median	711.3197631835938
summary	gm	n	12368.0
summary	gm	p05	592.1854370117187
summary	gm	p95	826.5695678710938
summary	gm	stdv	69.81471252441406
summary	wm	k	0.6390923353156182
summary	wm	mad	46.00433349609375
summary	wm	mean	997.1098022460938
summary	wm	median	999.989013671875
summary	wm	n	204244.0
summary	wm	p05	909.0605621337891
summary	wm	p95	1073.9481506347656
summary	wm	stdv	49.911521911621094
tpm	overlap	csf	0.19139303267002106
tpm	overlap	gm	0.4785355031490326
tpm	overlap	wm	0.5716810822486877
wm2max			0.40548492164550454

Provenance information

md5sum	aeab95f9c535bcbf35894a868e52876a
software	mriqc
version	0.11.0

Rate Image

Rating	Count
Invalid
Exclude
Usable
Good

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.